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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THYM rs28485407 chr3:20432763 A/G CDC34 chr19:531712-542092:+ 0.69 7.11 2.16E-10 Box Plot
THYM rs28563911 chr5:176714943 T/C LOC388955 chr2:63849182-63850159:- 0.84 12.93 1.18E-22 Box Plot
THYM rs28580074 chr5:176721198 T/C LOC388955 chr2:63849182-63850159:- 0.84 12.93 1.18E-22 Box Plot
THYM rs28628134 chr5:176714569 G/A LOC388955 chr2:63849182-63850159:- 0.84 12.93 1.18E-22 Box Plot
THYM rs28684504 chr5:176727438 T/C LOC388955 chr2:63849182-63850159:- 0.85 12.89 1.38E-22 Box Plot
THYM rs28709291 chr16:30083912 C/T ZNF254 chr19:24216207-24312763:+ 0.66 7.11 2.12E-10 Box Plot
THYM rs28715668 chr5:176699268 T/C LOC388955 chr2:63849182-63850159:- 0.84 12.93 1.19E-22 Box Plot
THYM rs2878686 chr5:176633749 C/T LOC388955 chr2:63849182-63850159:- -0.7 -9.97 1.91E-16 Box Plot
THYM rs28790030 chr18:10874325 G/A CT45A4 chrX:134928331-134953994:- 0.61 7.71 1.22E-11 Box Plot
THYM rs2880301 chr13:20100534 C/T GAGE12D chrX:49306370-49313697:+ 2.17 14.56 6.25E-26 Box Plot
THYM rs28876522 chr1:79022404 A/T GAGE12J chrX:49178536-49185863:+ 0.71 7.55 2.64E-11 Box Plot
THYM rs28932178 chr5:176637576 T/C LOC388955 chr2:63849182-63850159:- -0.74 -10.68 5.79E-18 Box Plot
THYM rs315758 chr5:169769141 T/C GRLF1 chr19:47421933-47508323:+ 0.68 7.87 5.75E-12 Box Plot
THYM rs315759 chr5:169768898 G/C GRLF1 chr19:47421933-47508323:+ 0.68 7.87 5.75E-12 Box Plot
THYM rs315765 chr5:169764838 A/C GRLF1 chr19:47421933-47508323:+ 0.68 7.87 5.75E-12 Box Plot